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As one who has an Alpine PWE-S8 and tried it in several applications, trust me, as bad as you may think the OE B&O subwoofer is, you will get no benefit from figuring out how to install that Alpine unit.
IF you were starting with an OE system that had no subwoofer at all you might find benefit, but that's not your situation.
One person's experienced opinion for your consideration.
Yes, that’s an amplifier. Subwoofers typically only need 2-4 wires depending on impedance and voice coil configuration. That alpine harness as pictured has a fuse on the thicker red wire. That implies this harness may be intended to run a dedicated power feed from the battery. Consult your installation manual to verify. The factory harness isn’t rated for much.