Where are you at? I've heard of these markups in California and a few other places. I ordered a Raptor back in November for $50 over invoice plus $249 doc fee, that's it. But I am still waiting on it, hope to have it this month finally. I am trading in my 2011 King Ranch with 28k miles and getting $30,700 for it.
Raptors on the lot typically demand MSRP and no rebates, you have to order to get a better deal, and wait a long time. There are some dealers in Texas that will sell them for $3k off but that is about the best I could find.
If you want more info, shoot me a PM.